Calculate a log-likelihood for a user-provided cluster assignment and count matrix, per the desired celda model.

Calculate a log-likelihood for a user-provided cluster assignment and count matrix, per the desired celda model.

calculateLoglikFromVariables(counts, model, ...)

Arguments

counts	The counts matrix used to generate the provided cluster assignments.
model	Celda model. Options available in `celda::available.models`.
...	Additional parameters.

Value

The log-likelihood of the provided cluster assignment for the provided counts matrix.

Examples

celda.sim = simulateCells(model="celda_CG")
loglik = calculateLoglikFromVariables(celda.sim$counts, model="celda_CG",
                                      sample.label=celda.sim$sample.label,
                                      z=celda.sim$z, y=celda.sim$y,
                                      K=celda.sim$K, L=celda.sim$L,
                                      alpha=celda.sim$alpha, beta=celda.sim$beta,
                                      gamma=celda.sim$gamma, delta=celda.sim$delta)